PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.O00889.1.p
Common NameLOC105967768, MIMGU_mgv1a010637mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 307aa    MW: 34673.7 Da    PI: 6.4457
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.O00889.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.94.2e-09152199455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Migut.O00889.1.p 152 SHSLAERARREKISKKMKCLQDLVPGC----NKVTGKAGMLDEIINYVQSLQ 199
                       8*************************9....677*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000837.72E-8146203No hitNo description
SuperFamilySSF474591.57E-16146217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.237148198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.6E-17148216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.0E-6152199IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.2E-10154204IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0009637Biological Processresponse to blue light
GO:0009911Biological Processpositive regulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MLRLHQSSPS TSSSSSSSEK NLMEQKQSSA LLHHRRLYQE QTNSWHNQDT RHVDLLSAVD  60
LSHHFPYHSI PKPEWQCNSS SLINREKRKA QFDMEENSEN IVEAEEEKSE ITAKTEMETS  120
GNTCSKESSK VSEVQKPDYI HVRARRGQAT DSHSLAERAR REKISKKMKC LQDLVPGCNK  180
VTGKAGMLDE IINYVQSLQK QVEFLSMKLA TVNPRLDFNV DDIFAKEIPA YISSLQAAQF  240
EATCLHYNTM QQGTSNCGGD ISLDQSQMLP HNKAENALLD PSFISQLQQL SGWESDWPSL  300
FNAGFH*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012847836.10.0PREDICTED: transcription factor HBI1-like
RefseqXP_012847837.10.0PREDICTED: transcription factor HBI1-like
TrEMBLA0A022QLX60.0A0A022QLX6_ERYGU; Uncharacterized protein
STRINGSolyc02g062690.2.13e-75(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40002142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36540.13e-54BR enhanced expression 2